Coral reefs worldwide are declining at an accelerating rate due to multiple types of human impacts. Meanwhile, new technologies with applications in reef science and conservation are emerging at an ever faster rate and are simultaneously becoming cheaper and more accessible. Technology alone cannot save reefs, but it can potentially help scientists and conservation practitioners study, mitigate, and even solve key challenges facing coral reefs. We examine how new and emerging technologies are already being used for coral reef science and conservation. Examples include drones, autonomous underwater vehicles (AUVs), 3D mapping and modeling tools, high resolution and nano satellite imagery, and a suite of monitoring and surveillance tools that are revolutionizing enforcement of sustainable reef fisheries. We argue that emerging technologies can play a pivotal role in tackling many of the critical issues facing coral reef conservation science and practice, but maximizing the impact of these technologies requires addressing several significant barriers. These barriers include lack of awareness of technologies and tools, prohibitive cost, lack of transferability across systems and/or scales, lack of technical expertise, and lack of accessibility. We discuss where analogous challenges have been overcome in another system and identify insights that can provide guidance for wise application of emerging technologies to coral reef science and conservation. Thoughtful consideration of, and adaptation to, these challenges will help us best harness the potential of emerging and future technological innovations to help solve the global coral reef crisis.
Coral reef refugia are habitats which possess physical, biological and ecological characteristics that make them likely to be relatively resilient to future climate change. Identification of refugia locations will be important to ensure suitable marine conservation planning is undertaken to protect sites where coral ecosystems will be better preserved now and in the future. This paper presents (1) a review of current knowledge of the oceanographic conditions and coral community in the Revillagigedo Archipelago Large Scale Marine Protected Area, (2) the first assessment of the potential for the Revillagigedo Archipelago to act as a climate refugia site for corals and coral reefs in the eastern tropical Pacific, and (3) consequent management and learning opportunities, to inform reef conservation both locally and globally. Through utilising published literature, remote and in situ environmental data, and field observations it was found that the Revillagigedo area exhibits a combination of distinctive characteristics in the coral community and in oceanographic processes which support conditions of refugia. The potential for refugia is further enhanced due to the absence of significant secondary anthropogenic stressors. This leads to a recommendation to establish the Revillagigedo as a globally significant ‘sentinel site’ where, through long-term monitoring of oceanographic conditions and of the coral and associated ecosystems, the effects of climate change can be quantified, and the effectiveness of specific refugia attributes established. This information may then be used to underpin the recognition of potential coral refugia elsewhere, and to guide MPA designation and management decisions to enhance their effectiveness.
As oceans continue to warm under climate change, understanding the differential growth responses of corals is increasingly important. Scleractinian corals exhibit a broad range of life-history strategies, yet few studies have explored interspecific variation in long-term growth rates under a changing climate. Here we studied growth records of two coral species with different growth forms, namely branching Isopora palifera and massive Porites spp. at an offshore reef (Myrmidon Reef) of the central Great Barrier Reef (GBR), Australia. Skeletal growth chronologies were constructed using a combination of X-radiographs, gamma densitometry, and trace element (Sr/Ca) analysis. General additive mixed-effect models (GAMMs) revealed that skeletal density of I. palifera declined linearly and significantly at a rate of 1.2% yr−1 between 2002 and 2012. Calcification was stable between 2002 and 2009, yet declined significantly at a rate of 12% yr−1 between 2009 and 2012 following anomalously high sea surface temperatures (SST). Skeletal density of massive Porites exhibited a significant non-linear response over the 11-year study period (2002−2012) in that density was temporarily reduced during the 2009–2010 anomalously hot years, while linear extension and calcification showed no significant trends. Linear extension, density and calcification rates of I. palifera increased to maximum growth of 26.7–26.9 °C, beyond which they declined. In contrast, calcification and linear extension of Porites exhibited no response to SST, but exhibited a significant linear decline in skeletal density with increasing SST. Our results reveal significant differences in coral growth patterns among coral growth forms, and highlight both the resistant nature of massive Porites and sensitivity of branching I. palifera. Future research should target a broad range of coral taxa within similar environments to provide a community-level response of ocean warming on coral reef communities.
In this paper, we aim to provide optimal parameters for micro-computed tomography scans of fish otoliths. We tested fifteen different combinations to sagittae. The images were scaled to Hounsfield units, and segmented in two distinct volumes-of-interest (external and internal). The strategy we applied, for identifying optimum scan settings for otoliths, included analyses of the sinogram, the distribution of the Hounsfield units and the signal-to-noise ratio. Based on these tests, the optimum sets of parameters for the acquisition of tomographic images of sagittal otoilths were 80 kV, 220 μA, and 0.5 mm aluminum filter. The method allowed 3D shape analysis, internal and external density distribution, layer-by-layer density segmentation, and a potential objective method to count growth rings in otoliths. It was possible to compare mean densities between species, and we observed a significant difference among them. In addition, there are ontogenic changes, which could be increasing or decreasing the density. In this study, we applied tomography for several otolith analysis, that could be of great interest for future studies in diverse areas that use otoliths as the basic structure of analysis, or represents a new research line called eco-densitometry of otoliths, where tomography could be applied to explore the density within an ecological perspective.
Shallow water coral reefs and deep sea coral communities are sensitive to current and future environmental stresses, such as changes in sea surface temperatures (SST), salinity, carbonate chemistry, and acidity. Over the last half-century, some reef communities have been disappearing at an alarming pace. This study focuses on the Gulf of Mexico, where the majority of shallow coral reefs are reported to be in poor or fair condition. We analyze the RCP8.5 ensemble of the Community Earth System Model v1.2 to identify monthly-to-decadal trends in Gulf of Mexico SST. Secondly, we examine projected changes in ocean pH, carbonate saturation state, and salinity in the same coupled model simulations. We find that the joint impacts of predicted higher temperatures and changes in ocean acidification will severely degrade Gulf of Mexico reef systems by the end of the twenty-first century. SSTs are likely to warm by 2.5–3°C; while corals do show signs of an ability to adapt toward higher temperatures, current coral species and reef systems are likely to suffer major bleaching events in coming years. We contextualize future changes with ancient reefs from paleoclimate analogs, periods of Earth's past that were also exceptionally warm, specifically rapid “hyperthermal” events. Ancient analog events are often associated with extinctions, reef collapse, and significant ecological changes, yet reef communities managed to survive these events on evolutionary timescales. Finally, we review research which discusses the adaptive potential of the Gulf of Mexico's coral reefs, meccas of biodiversity and oceanic health. We assert that the only guaranteed solution for long-term conservation and recovery is substantial, rapid reduction of anthropogenic greenhouse gas emissions.
Herbivory is an important process in the general structuring of coral reef benthic communities. However, evidence of its ability to control coral reef benthic cyanobacterial mats, which have recently proliferated on reefs worldwide, remains ambivalent. Here, we report that the French Angelfish (Pomacanthus paru), Striped Parrotfish (Scarus iseri), Rock Beauty (Holacanthus tricolor), Ocean Surgeonfish (Acanthurus bahianus), Blue Parrotfish (Scarus coeruleus), and Atlantic Blue Tang (Acanthurus coeruleus) consume benthic cyanobacterial mats on coral reefs in Bonaire, Netherlands. We documented the foraging patterns of P. paru and S. iseri, and found that benthic cyanobacterial mats comprised 36.7% ± 5.8% and 15.0% ± 1.53% (mean ± standard error) of the total bites taken by P. paru and S. iseri respectively. This magnitude of consumption suggests that grazing by reef fishes may represent a potentially important, but previously undocumented, top-down control on benthic cyanobacterial mats on Caribbean reefs.
Two-dimensional numerical modelling of swell wave dynamics on idealized fringing reefs is performed using SWAN, covering a wide range of bathymetries, climate forcing conditions and water depths over the reefs. The results illustrate the impact of reef geometry and bathymetry, coral species and sea level rise on key hydrodynamic parameters on the reef and on forces on corals. The modelling demonstrates that one-dimensional models underestimate the wave action on the reef flat. Wide short reefs and narrow long reefs have similar wave heights at the centre of the reef flat. For a given reef length, the wave height first decreases with increasing reef width, then increases to a local maximum when reef width is approximately equal to the reef length, and then decreases for further increases in width. This pattern is a result of combined dissipation and refraction processes, which combine to lead to different zones of cross-reef wave transformation. Provided that a reef retains its hydrodynamic functions in breaking and refracting the waves, sea level rise enhances the wave heights and wave orbital velocities on the reef flat. If vertical coral growth does not keep pace with sea level rise, loss of the hydrodynamic functions of the reef may occur on deeper reefs, and result in a reduction of near bed velocities with sea level rise. Hydrodynamic forces on corals vary by coral species and SLR changes the magnitude of the forces on different species in different ways, which may lead to less favourable conditions for certain coral species. For long period swell, the intermediate size corals are drag-dominated and behave similarly to branching corals, whereas for short period swell their behavior is similar to that of the inertia-dominated massive corals. For intermediate corals different responses to SLR may therefore be expected for different overall regional wave climates. Over time, this process may contribute to changes in the structural complexity of reefs. The influence of sea level rise on the forces on corals on the reef flat is different under swell and cyclonic wind conditions since wind influences wave period in the latter case.
Bleaching and disease are decimating coral reefs especially when warming promotes bleaching pathogens, such as Vibrio coralliilyticus. We demonstrate that sterilized washes from three common corals suppress V. coralliilyticus but that this defense is compromised when assays are run at higher temperatures. For a coral within the ecologically critical genus Acropora, inhibition was 75 to 154% greater among colonies from coral-dominated marine protected areas versus adjacent fished areas that were macroalgae-dominated. Acropora microbiomes were more variable within fished areas, suggesting that reef degradation may also perturb coral microbial communities. Defenses of a robust poritid coral and a weedy pocilloporid coral were not affected by reef degradation, and microbiomes were unaltered for these species. For some ecologically critical, but bleaching-susceptible, corals such as Acropora, local management to improve reef state may bolster coral resistance to global change, such as bacteria-induced coral bleaching during warming events.
The thermal microenvironments of corals is a topic of current interest given their relationship to coral bleaching. We present computational fluid dynamics (CFD) model of corals with both smooth and rugged polyp surface topographies for two species of massive corals (Leptastrea purpurea and Platygyra sinensis) in order to predict their microscale surface warming. This study explores whether variation in polyp depth (PD) may directly effect a coral overall surface area-to-volume (A/V) ratio and consequently its surface warming. Validation of our models was made against detailed laboratory measurements of coral surface warming and thermal boundary layer thickness. Our results suggested that while differences in surface warming exist between smooth surfaces and surfaces covered in micro-polyps (5 mm depth), the variation in terms of surface warming is small (∼0.18–0.19∘C) and it can be largely attributed to increasing A/V ratios. Our results demonstrated good agreement with measurements of surface temperatures on living corals and that ignoring the presence of polyps by modelling heat transfer associated with a smooth surface makes no material difference to the values obtained or the interpretation of the processes leading to surface warming.
Pervasive and sustained coral diseases contribute to the systemic degradation of reef ecosystems, however, to date an understanding of the physicochemical controls on a coral disease event is still largely lacking. Water circulation and residence times and submarine groundwater discharge (SGD) all determine the degree to which reef organisms are exposed to the variable chemistry of overlying waters; understanding these physical controls is thus necessary to interpret spatial patterns in coral health. The recent discovery of coral Black Band Disease at Mākua Reef on Kaua‘i, Hawai‘i prompted an investigation into the physicochemical drivers and geomorphic controls of reef water circulation, and the temporally variable nutrient fluxes derived from SGD. Results reveal localized stagnant water parcels at Mākua Reef where groundwater-derived high nutrient loading and low salinities act in concert as stressors to coralline health – and where Black Band Disease was uniquely identified. The observed high nutrient levels during low tide conditions are likely associated with nearby upstream cesspools and drain fields. Information obtained using such a multidisciplinary approach has direct value for successful management of coastal aquifers and the health and sustainability of adjacent nearshore coral reef ecosystems.