Monitoring

A resourceful and adaptable method to obtain data on the status of seagrass meadows

Foster NR, Fotheringham DG, Brock DJ, Waycott M. A resourceful and adaptable method to obtain data on the status of seagrass meadows. Aquatic Botany [Internet]. 2017 ;141:17 - 21. Available from: http://www.sciencedirect.com/science/article/pii/S030437701630184X
Freely available?: 
No
Summary available?: 
No
Approximate cost to purchase or rent this item from the publisher: 
US $35.95
Type: Journal Article

Coastline degradation, as well as subsequent ecosystem loss, has long been attributed to anthropogenic stress and is an all too familiar issue affecting coastal habitats. Should management and conservation efforts fail to improve the quality of coastal ecosystems and the services they provide, they may be irrevocably damaged. A significant limitation to conservation efforts is often the ability to track change in seagrass meadows due to the significant time and cost of monitoring efforts in underwater habitats. Remote sensing is often a tool used to improve our knowledge of habitat status, however, ground-truthing remote sensing results is difficult when historical data is required. We apply an innovative and resourceful approach to the attainment of data to check the status of seagrass meadows from resources that are available in many areas due to the collection of other data sets. We employ the use of underwater digital photographs originally taken for monitoring sediment movement patterns. We were successfully able to develop a method to critically and easily evaluate these photographs for habitat status, enabling the generation of a data set unable to be obtained in other ways. This method can further be utilised in a citizen science project, for other underwater digital photographs, to support the assessment of coastal submerged ecosystem habitat status.

Predicted distribution of whales at risk: identifying priority areas to enhance cetacean monitoring in the Northwest Atlantic Ocean

Gomez C, Lawson J, Kouwenberg AL, Moors-Murphy H, Buren A, Fuentes-Yaco C, Marotte E, Wiersma YF, Wimmer T. Predicted distribution of whales at risk: identifying priority areas to enhance cetacean monitoring in the Northwest Atlantic Ocean. Endangered Species Research [Internet]. 2017 ;32:437 - 458. Available from: http://www.int-res.com/abstracts/esr/v32/p437-458/
Freely available?: 
Yes
Summary available?: 
No
Type: Journal Article

Using long-term data from government, non-government, academic, and industry sources, we developed species distribution models (SDMs) to predict priority areas in which to target and enhance blue whale Balaenoptera musculus and northern bottlenose whale Hyperoodon ampullatus monitoring efforts in eastern Canada. Priority areas for blue whales were located primarily on the Scotian Shelf and along the south shelf break in waters off Newfoundland. Priority areas for northern bottlenose whales were identified primarily in areas along the edges of the eastern Scotian Shelf and the Newfoundland and Labrador Shelves, in submarine canyons, and deep basins. The SDM results and the tools presented in this study indicate that there are few conservation areas in eastern Canada that currently protect whales at risk, and that priority areas for blue and northern bottlenose whales overlap with regions where noise-producing activities (shipping and seismic exploration) occur. This study also highlighted large gaps in the cetacean data related to human activities (e.g. seismic survey lines are outdated and recent information from the past 5 to 10 yr is not available). The SDM approach developed in this study can be used as an iterative, adaptive process by including updated data as it becomes available, further refining and validating the SDM results and thereby improve our understanding of the distribution of cetaceans and noise-producing activities in eastern Canada.

Enhancing fish Underwater Visual Census to move forward assessment of fish assemblages: An application in three Mediterranean Marine Protected Areas

Prato G, Thiriet P, Di Franco A, Francour P. Enhancing fish Underwater Visual Census to move forward assessment of fish assemblages: An application in three Mediterranean Marine Protected Areas. PLOS ONE [Internet]. 2017 ;12(6):e0178511. Available from: http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0178511
Freely available?: 
Yes
Summary available?: 
No
Type: Journal Article

Monitoring fish assemblages is needed to assess whether Marine Protected Areas (MPAs) are meeting their conservation and fisheries management goals, as it allows one to track the progress of recovery of exploited species and associated communities. Underwater Visual Census techniques (UVC) are used to monitor fish assemblages in MPAs. UVCs should be adapted to fish abundance, body-size and behaviour, which can strongly affect fish detectability. In Mediterranean subtidal habitats, however, UVC strip transects of one surface area (25x5 m2) are commonly used to survey the whole fish assemblage, from large shy fish to small crypto-benthic fish. Most high trophic level predators (HTLPs) are large shy fish which rarely swim close to divers and, consequently, their abundance may be under-estimated with commonly used transects. Here, we propose an improvement to traditional transect surveys to better account for differences in behaviour among and within species. First, we compared the effectiveness of combining two transect surface areas (large: 35x20 m2; medium: 25x5 m2) in quantifying large, shy fish within and outside Mediterranean MPAs. We identified species-specific body-size thresholds defining a smaller and a larger size class better sampled by medium and large transects respectively. Combining large and medium transects provided more accurate biomass and species richness estimates for large, shy species than using medium transects alone. We thus combined the new approach with two other transect surface areas commonly used to survey crypto-benthic (10x1 m2) and necto-benthic (25x5 m2) species in order to assess how effectively MPAs protection the whole fish assemblage. We verified that MPAs offer significant protection for HTLPs, their response in terms of biomass and density increase in MPAs was always higher in magnitude than other functional groups. Inside MPAs, the contribution of HTLP reached >25% of total fish biomass, against < 2% outside MPAs. Surveys with multiple transect surface areas allow for a more realistic assessment of the structure of the whole fish assemblage and better assessment of potential recovery of HTLPs within reserves of HTLP.

Application of environmental DNA to detect an endangered marine skate species in the wild

Weltz K, Lyle JM, Ovenden J, Morgan JAT, Moreno DA, Semmens JM. Application of environmental DNA to detect an endangered marine skate species in the wild. PLOS ONE [Internet]. 2017 ;12(6):e0178124. Available from: http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0178124
Freely available?: 
Yes
Summary available?: 
No
Type: Journal Article

Environmental DNA (eDNA) techniques have only recently been applied in the marine environment to detect the presence of marine species. Species-specific primers and probes were designed to detect the eDNA of the endangered Maugean skate (Zearaja maugeana) from as little as 1 L of water collected at depth (10–15 m) in Macquarie Harbour (MH), Tasmania. The identity of the eDNA was confirmed as Zmaugeana by sequencing the qPCR products and aligning these with the target sequence for a 100% match. This result has validated the use of this eDNA technique for detecting a rare species, Zmaugeana, in the wild. Being able to investigate the presence, and possibly the abundance, of Zmaugeana in MH and Bathurst harbour (BH), would be addressing a conservation imperative for the endangered Zmaugeana. For future application of this technique in the field, the rate of decay was determined for Zmaugeana eDNA under ambient dissolved oxygen (DO) levels (55% saturation) and lower DO (20% saturation) levels, revealing that the eDNA can be detected for 4 and 16 hours respectively, after which eDNA concentration drops below the detection threshold of the assay. With the rate of decay being influenced by starting eDNA concentrations, it is recommended that samples be filtered as soon as possible after collection to minimize further loss of eDNA prior to and during sample processing.

Quantitative argument for long-term ecological monitoring

Giron-Nava A, James CC, Johnson AF, Dannecker D, Kolody B, Lee A, Nagarkar M, Pao GM, Ye H, Johns DG, et al. Quantitative argument for long-term ecological monitoring. Marine Ecology Progress Series [Internet]. 2017 ;572:269 - 274. Available from: http://www.int-res.com/abstracts/meps/v572/p269-274/
Freely available?: 
Yes
Summary available?: 
No
Type: Journal Article

Although it seems obvious that with more data, the predictive capacity of ecological models should improve, a way to demonstrate this fundamental result has not been so obvious. In particular, when the standard models themselves are inadequate (von Bertalanffy, extended Ricker etc.) no additional data will improve performance. By using time series from the Sir Alister Hardy Foundation for Ocean Science Continuous Plankton Recorder, we demonstrate that long-term observations reveal both the prevalence of nonlinear processes in species abundances and an improvement in out-of-sample predictability as the number of observations increase. The empirical results presented here quantitatively demonstrate the importance of long-term temporal data collection programs for improving ecosystem models and forecasts, and to better support environmental management actions. 

Reliability and utility of citizen science reef monitoring data collected by Reef Check Australia, 2002–2015

Done T, Roelfsema C, Harvey A, Schuller L, Hill J, Schläppy M-L, Lea A, Bauer-Civiello A, Loder J. Reliability and utility of citizen science reef monitoring data collected by Reef Check Australia, 2002–2015. Marine Pollution Bulletin [Internet]. 2017 ;117(1-2):148 - 155. Available from: http://www.sciencedirect.com/science/article/pii/S0025326X17300899
Freely available?: 
Yes
Summary available?: 
No
Type: Journal Article

Reef Check Australia (RCA) has collected data on benthic composition and cover at > 70 sites along > 1000 km of Australia's Queensland coast from 2002 to 2015. This paper quantifies the accuracy, precision and power of RCA benthic composition data, to guide its application and interpretation. A simulation study established that the inherent accuracy of the Reef Check point sampling protocol is high (<± 7% error absolute), in the range of estimates of benthic cover from 1% to 50%. A field study at three reef sites indicated that, despite minor observer- and deployment-related biases, the protocol does reliably document moderate ecological changes in coral communities. The error analyses were then used to guide the interpretation of inter-annual variability and long term trends at three study sites in RCA's major 2002–2015 data series for the Queensland coast.

Generating actionable data for evidence-based conservation: The global center of marine biodiversity as a case study

Fox HE, Barnes MD, Ahmadia GN, Kao G, Glew L, Haisfield K, Hidayat NIsmu, Huffard CL, Katz L, Mangubhai S, et al. Generating actionable data for evidence-based conservation: The global center of marine biodiversity as a case study. Biological Conservation [Internet]. 2017 ;210:299 - 309. Available from: http://www.sciencedirect.com/science/article/pii/S0006320716311247
Freely available?: 
No
Summary available?: 
No
Approximate cost to purchase or rent this item from the publisher: 
US $35.95
Type: Journal Article

Sufficiently rigorous monitoring and evaluation can assess the effectiveness of management actions to conserve natural resources. However, costs of monitoring can be high in relation to program budgets, so it is critical to design monitoring efforts to ensure a high return on investment. To assess the relative contribution of different monitoring strategies to yield information for management decisions, we examine the evolution of a multi-year monitoring program across several MPAs in West Papua, Indonesia. Three monitoring strategies were implemented: external expert, science practitioner, and community monitoring staff. We place the monitoring objectives in a decision science framework, with six explicit fundamental objectives for monitoring to evaluate performance of marine protected areas. We examine each strategy in light of the six objectives to evaluate: 1) power to detect change, 2) extent of local capacity development, and 3) cost effectiveness. Over time, costs were reduced and scientific value increased through clear communication of science objectives, outcome-driven experimental design, adequately resourced monitoring programs, and a long-term view that anticipates phasing out outside consultants and transitioning monitoring responsibilities fully to locally-based staff. Investments to develop capacity of staff living locally to perform data management, analysis, interpretation, and science communication proved the most cost-effective approach in the long-term. With many globally important ecosystems in developing countries, developing local scientific capacity for the full cycle of monitoring is key to informed decision-making and ensuring long-term sustainability of efforts to conserve biodiversity.

A cost-effectiveness analysis of alternative survey methods used for the monitoring of marine recreational fishing in France

Bellanger M, Levrel H. A cost-effectiveness analysis of alternative survey methods used for the monitoring of marine recreational fishing in France. Ocean & Coastal Management [Internet]. 2017 ;138:19 - 28. Available from: http://www.sciencedirect.com/science/article/pii/S0964569117300261
Freely available?: 
No
Summary available?: 
No
Approximate cost to purchase or rent this item from the publisher: 
US $35.95
Type: Journal Article

The growth of marine recreational activities raises the issues of the current lack of knowledge on these activities and the information required to assess their potential impacts. Indeed, the monitoring of unrecorded activities is a great challenge, especially when basic information, such as the size of the population practicing the different activities, is unknown. In this paper, the experience of the monitoring of marine recreational fishing was used to carry out a diagnosis study to assess the cost-effectiveness of survey methods used in France between 2004 and 2012. Costs of alternative surveys were balanced with data quality, and particular attention was paid to potential biases. Results showed that the involvement of citizens through diary surveys could be a cost-effective option when the recruitment of participants complied with randomness and representativeness requirements. The outcomes of this study provide useful insights to help managers and decision makers implement monitoring schemes in similar contexts.

Monitoring of persistent organic pollutants in the polar regions: knowledge gaps & gluts through evidence mapping

Mangano MCristina, Sarà G, Corsolini S. Monitoring of persistent organic pollutants in the polar regions: knowledge gaps & gluts through evidence mapping. Chemosphere [Internet]. 2017 ;172:37 - 45. Available from: http://www.sciencedirect.com/science/article/pii/S0045653516318677
Freely available?: 
No
Summary available?: 
No
Approximate cost to purchase or rent this item from the publisher: 
US $41.95
Type: Journal Article

Persistent organic pollutants (POPs) are widespread compounds that accumulating in polar regions canalise through trophic webs. Although several dozens of studies have been carried out in the last decades, the information is generally scattered across a large number of literature sources. This does not allow an efficient synthesis and constraints our understanding on how address future monitoring plans and environmental conservation strategies on the Polar Regions with respect to POPs. Thus, here, we present the outcome of a systematic map (SM) to scope, screen and chart evidences from literature dealing with POPs in Polar regions. The SMs strive to produce rigorous guidelines and have recently been proposed as useful and effective tools to summarise growing bodies of research that seek to reduce bias and increase reliability, particularly in the case of high priority and controversial topics. Our SM was based on 125 polar studies, focussing on the most studied target species among those listed in the International Union for Conservation of Nature's Red List (IUCN Red List). To facilitate analysis of evidence, the studies were classified into Accumulation Monitoring (accounting for POP monitoring through sub-organismal, functional and population levels) and Food Web Monitoring approaches (accounting for contaminants monitoring through food webs). Our SM allowed us to assess and visualise, a set of both knowledge gaps and gluts and lastly a list was provided to address future research on POPs in Polar Regions.

A bacterial community-based index to assess the ecological status of estuarine and coastal environments

Aylagas E, Borja A, Tangherlini M, Dell'Anno A, Corinaldesi C, Michell CT, Irigoien X, Danovaro R, Rodriguez-Ezpeleta N. A bacterial community-based index to assess the ecological status of estuarine and coastal environments. Marine Pollution Bulletin [Internet]. 2017 ;114(2):679 - 688. Available from: http://www.sciencedirect.com/science/article/pii/S0025326X16308670
Freely available?: 
No
Summary available?: 
No
Approximate cost to purchase or rent this item from the publisher: 
US $39.95
Type: Journal Article

Biotic indices for monitoring marine ecosystems are mostly based on the analysis of benthic macroinvertebrate communities. Due to their high sensitivity to pollution and fast response to environmental changes, bacterial assemblages could complement the information provided by benthic metazoan communities as indicators of human-induced impacts, but so far, this biological component has not been well explored for this purpose. Here we performed 16S rRNA gene amplicon sequencing to analyze the bacterial assemblage composition of 51 estuarine and coastal stations characterized by different environmental conditions and human-derived pressures. Using the relative abundance of putative indicator bacterial taxa, we developed a biotic index that is significantly correlated with a sediment quality index calculated on the basis of organic and inorganic compound concentrations. This new index based on bacterial assemblage composition can be a sensitive tool for providing a fast environmental assessment and allow a more comprehensive integrative ecosystem approach for environmental management.

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